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Footprintdb数据库

WebDatabases and repositories currently included in footprintDB: If you want to search for an specific entry use the Search Entry Form. If you want to search for a protein sequence or a DNA motif use the Sequence Search Form. If you want to download motifs or sites for another databases different from 3D-footprint, please visit the original sources or ask … WebDec 18, 2024 · ChIP-Atlas收集整理了SRA 数据库 中的大量chip_seq数据,并基于这些原始数据进行了后续分析,将分析结果整理成在线服务并发布,方便检索与查询,网址如下. …

快上车!综合数据库footprintDB同时搞定转录因子与靶基 …

WebJan 15, 2014 · Results: FootprintDB integrates some of the most comprehensive freely available libraries of curated DNA binding sites and systematically annotates the binding … WebAnimalTFDB is a comprehensive database including classification and annotation of genome-wide transcription factors (TFs), and transcription cofactors in 97 animal … teks protokol apel pembukaan https://tfcconstruction.net

转录因子预测数据库:一 - 知乎

WebInferred None. By Evidence Type. B1H ChIP-chip ChIP-exo ChIP-seq ChIP-seq+ChIP-exo COMPILED Dap-seq DNaseI footprinting EMSA Misc PBM PBM, CSA and or DIP-chip … WebJan 4, 2024 · 单图复现如下: 进入footprintDB主页,点击侧边栏Search菜单下Sequence进入检索页面,命名检索结果,填入有效邮件地址,检索框输入GGACTTTT,物种、数据库和结构域选择All,其他参数默认,点击Search。. 结果如下 ,复制到Excel中,数据筛选小鼠 (Mus musculus),得到25个 ... WebNov 6, 2024 · 对于转录因子而言,我们最想知道的信息就是其对应的靶基因。转录因子相关数据库非常的多,有些数据库直接提供了靶基因的信息,比如TRANSFAC, 有些数据库只提供了motif的信息,比如JASPAR, 我们只能通过软件预测在基因的启动子序列上是否有对应 … teks protokol upacara bendera

手把手带你用UCSC查找心仪基因转录因子 - 腾讯云开发者社区-腾 …

Category:footprintDB - Database Commons - CNCB

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Footprintdb数据库

转录调控实战 一文解决转录调控问题 chIP-seq ATAC-seq

WebAnimalTFDB is a comprehensive database including classification and annotation of genome-wide transcription factors (TFs), and transcription cofactors in 97 animal genomes. The TFs are further classified into 73 families based on their DNA-binding domain (DBD) and cofactors are classified into 83 families and 6 categories. You can browse by. WebDec 18, 2024 · Cistrome DB:人和小鼠的chip_seq数据库 - 腾讯云开发者社区-腾讯云

Footprintdb数据库

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http://bioinfo.life.hust.edu.cn/AnimalTFDB/#!/ WebFootprintDB is a database and search engine that compiles regulatory sequences from open access libraries of curated DNA cis-elements and motifs, and their associated …

WebJan 25, 2024 · 本文转载自嘉因微信公众号,已获得授权。查看最新文章,敬请关注嘉因,微信ID:rainbow-genome. 作者:小丫 来源: 嘉因 《点鼠标就能找启动子区的motif》, … WebMay 8, 2024 · footprintDB是一个综合性的转录因子数据库,通过整合多个转录因子相关的数据库,最终构建出一个非冗余的数据集,在该数据库中,存储了transcription factors, …

WebJan 15, 2014 · The first release contains 2422 unique TF sequences, 10 112 DNA binding sites and 3662 DNA motifs. A survey of the included data sources, organisms and TF families was performed together with proprietary database TRANSFAC, finding that footprintDB has a similar coverage of multicellular organisms, while also containing …

WebJun 28, 2016 · FootprintDB integrates some of the most comprehensive freely available libraries of curated DNA binding sites and systematically annotates the binding interfaces …

WebAug 8, 2024 · 247 人 赞同了该文章. 尽管前面我介绍了一些数据库的使用教程,比如【 GEO数据库使用教程及在线数据分析工具 】,在文章【 生物数据库那么多,你知道几个?. 这个工具可以让你找到想要的数据库 】介绍了怎么查找相关的数据库,这里我将收藏的数据 … teks protokol upacara bahasa inggrishttp://www.biotrainee.com/thread-1215-1-1.html teks protokol upacara bendera di sekolahWebJan 15, 2024 · 以上是“footprintDB数据库有什么用”这篇文章的所有内容,感谢各位的阅读! 相信大家都有了一定的了解,希望分享的内容对大家有所帮助,如果还想学习更多知识,欢迎关注亿速云行业资讯频道! teks protokol upacara hari guru 2022